Protein detail page of 32037670

Database of Origin NCBI
Species Pseudomonas aeruginosa UCBPP-PA14
Description COG2224: Isocitrate lyase [Pseudomonas aeruginosa UCBPP-PA14]
Round Number 4
Class Name 1IGWA
Amino Acids 531
Class Similarity 0.46
Class Identity 0.34
Model Numbered as the template pdb file Model
Model With 3D Numbers Model
Model numbered as the original sequence (e.g. Swiss-prot numbering) Model
Attempt to update model (Works only in new databases) Start

Numbering schemes
          0        0         0         0         0         00 0    0 0 0    0 0   0         0    0 0   0   0 0    0       0 00     0 0  0    0 0   0 0     0 0 0         0         0         0       0 00         00   0       0         0     0 0  0        0 0         0    0 0   0   0 0    0     0 0  0         0         0         0        0 0         00 0       0         0    0 0   0  0 0     0         0   0 0    0 0 0      0         0         0         0         0         0   0 0    0         0   0 0    0         0         0         0         0         0         00 
          0        0         0         0         0         00 0    0 0 0    0 0   0         0    0 0   0   0 0    1       1 11     1 1  1    1 1   1 1     1 1 1         1         1         1       1 11         11   1       2         2     2 2  2        2 2         2    2 2   2   2 2    2     2 2  2         2         2         3        3 3         33 3       3         3    3 3   3  3 3     3         3   3 3    3 3 3      3         4         4         4         4         4   4 4    4         4   4 4    4         4         4         5         5         5         55 
Swissprot 0        1         2         3         4         55 5    5 5 6    6 6   7         8    8 8   9   9 9    0       0 01     1 1  2    2 2   3 3     3 3 4         5         6         7       7 78         99   9       0         1     1 1  2        2 3         4    4 4   5   5 5    6     6 6  7         8         9         0        0 1         22 2       3         4    4 4   5  5 5     6         7   7 7    8 8 8      9         0         1         2         3         4   4 4    5         6   6 6    7         8         9         0         1         2         33 
          1        0         0         0         0         01 2    7 8 0    5 6   0         0    5 6   0   4 5    0       8 90     6 7  0    5 6   0 1     7 8 0         0         0         0       8 90         01   2       0         0     6 7  0        9 0         0    5 6   0   4 5    0     6 7  0         0         0         0        9 0         01 2       0         0    5 6   0  3 4     0         0   4 5    0 2 3      0         0         0         0         0         0   4 5    0         0   4 5    0         0         0         0         0         0         01 
Sequence  msayqneikavaalkekngsswsainpeyaarmriqnrfktgldiakytaa IMRKDM aeydadss VYTQSLGCWHGFIGQQKLIS ikkhlkttn KRYLYLSGWMVAAL rsdfgplp DQSMHEKTA vsgli EELYTFL rqadareldllftgldaaraagdkakeaellaqidnfethv VPIIADIDAGFGN 0 AEATYLLAKKMIEAGACCIQIENQV sdekqcghqdgkv TVPHIDFLAKINAVRY aflelgvdd GVIVARTDSLGA gltkqiavtnepgdlgdlynsfldceeiseaelgngdvvikre GKLLRPKRLASN lfqfrkgtgedrcvldcitslqng ADLLWIET ekphvgqikamvdrirevipn AKLVYNNS psfnwtlnfrqqvfdafvaegkdvsaydrnklmsveyddtelakvadekirtfqrdgsahag IFHHLITLPTYHTAALSTDN lakgyfadegmlayvkgvqrqelrqgiacvkhqnmagsdigdnhkeyfageaalkasgkdntmnqfh 
                                                              0    0          0  0         0     0           0  0         0          0       0       0     0                                           0  0        0   0         0         0   0               0    0         0           0        0 0                                             0      0   0                          0    0 0                       0      0                                                                0        0         0                                                                     
3DM                                                           0    0          0  0         0     0           0  0         0          0       0       0     0                                           0  0        0   0         0         0   0               0    1         1           1        1 1                                             1      1   1                          1    1 1                       1      1                                                                1        1         1                                                                     
                                                              0    0          0  1         2     2           2  3         4          4       4       5     5                                           5  6        6   7         8         9   9               9    0         1           1        2 2                                             2      3   3                          3    4 4                       4      5                                                                5        6         7                                                                     
                                                              1    6          7  0         0     6           7  0         0          1       9       0     6                                           7  0        9   0         0         0   4               5    0         0           1        0 2                                             3      0   4                          5    0 2                       3      0                                                                1        0         0                                                                     




Possible alternative alignments

Class Round Similarity Identity Sequence
1IGWA 4 0.46 0.34 IMRKDM VYTQSLGCWHGFIGQQKLIS KRYLYLSGWMVAAL DQSMHEKTA EELYTFL VPIIADIDAGFGN AEATYLLAKKMIEAGACCIQIENQV TVPHIDFLAKINAVRY GVIVARTDSLGA GKLLRPKRLASN ADLLWIET AKLVYNNS IFHHLITLPTYHTAALSTDN  
1F61A 4 0.46 0.35 RKDMAE VYTQSLGCWHGFIGQQKLIS KRYLYLSGWMVAAL DQSMHEKTA EELYTFL VPIIADIDAGFGN AEATYLLAKKMIEAGACCIQIENQV TVPHIDFLAKINAVRY GVIVARTDSLGA GKLLRPKRLASN ADLLWIET AKLVYNNS IFHHLITLPTYHTAALSTDN  

The sequence marked in yellow is used in the alignment. The other sequences are alignments produced in different subfamilies or different alignments rounds. Differences between the used sequence and the alternatives are marked in red. Differences might indicate that the alignment quality might be insecure.